Home | GBrowse | GBlast | Assembly | ORFs | Domains | Download | What's New | Getting Started | Login | Assembly Data: proseola

Instructions: Search using a sequence name, gene name, locus, or other landmark. The wildcard character * is allowed. To center on a location, click the ruler. Use the Scroll/Zoom buttons to change magnification and position.
Examples : supercontig_10 , supercontig_10:20000-25000 , read:Hox33403D04.b.ab1 , supercontig_1 , gene:U1Zn .

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*Overview track

Closure Repeat Regions plugin:Blast Against Displayed Sequence Read, Partner in Different Supercontig / Scaffold
Coding sequence plugin:Restriction Sites Read, Partner Missing
Contig Quality plugin:SAGE Graph Read, Partner Unplaced
Contigs plugin:SAGE Results Read, Partner within Same Contig
DNA/GC Content Protein-coding genes Six Frame Translation
Exons rDNA snRNAs
Intergenic BlastX Hits Read Overlap Coverage Telomere Repeat
Introns Read, Orientation Error Transcription
Named genes Read, Partner in Different Contig with Negative Gap tRNAs
plugin:Annotate All Orfs Read, Partner in Different Contig with Positive Gap
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Assembly and gene information provided by David and Jessica Mark Welch, dmarkwelch@mbl.edu

This database is hosted by the JBPC GMOD Server. Bug reports and technical problems should be reported to biocomp@lists.mbl.edu.

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